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PhD Position for Identification of Structure-function Relationships in Methanogenic Microbiomes
Do you want to be the first to unravel structure function relationships in anaerobic microbiomes?
Job description
Anaerobic microbiomes are playing a crucial role in our society ranging from food fermentations, via the intestinal track towards waste bioprocessing in anaerobic digestors. In anaerobic microbiomes substrates are converted to a diverse array of products in an extremely complex network of different microorganisms that cooperate to establish the conversions observed. Depending on the conditions imposed, different product formation pathways are established involving different guilds of microorganisms. The objective of this project is to unravel the role of the different microorganisms in the microbiome to eventually obtain a quantitative description of the overall process. We have established an experimental infrastructure (UNLOCK) that enables paralelized high resolution phenotypic characterisation of microbiomes in bioreactors. Phenotypic characterisation will be combined with genotypic characterisation of the microbiomes in collaboration with our UNLOCK partners in Wageningen.
This project combines laboratory bioreactor experiments with data processing and process modeling to obtain a quantitative description of the process as a resultant of the different guild of microorganisms involved. Consequently, besides a clear affinity with laboratory experiments and microbial communities, a strong data and computational/modeling background is desirable. The modeling framework that will be established in this project will contribute to a wide range of societal developments that depend on the understanding and control of anaerobic microbiomes.
Job requirements
Msc in life sciences, biotechnology, microbial ecology, or microbiology with a strong affinity for laboratory experiments and computational procedures for data processing and bioprocess modeling.
TU Delft (Delft University of Technology)
Working at TU Delft means contributing to solutions that really make a difference.
For over 180 years, we have been training engineers who make an impact worldwide in companies, government bodies, or as entrepreneurs. Our alumni turn knowledge into concrete solutions for the challenges of today and tomorrow.
These challenges are changing rapidly. That is why we focus on themes such as energy, climate, digitalisation, artificial intelligence (AI), and smart mobility every day. Our education and research are directly aligned with what society needs now and in the future.
At TU Delft, our people make the difference. With their knowledge and curiosity, our staff provide a high-quality education and conduct pioneering research that extends beyond the campus. You will have the opportunity to take the initiative, work with others, and grow as a professional.
Working at TU Delft means join an international community of professionals and students. Together, we create knowledge, innovations, and solutions that help move the world forward.
Faculty Applied Sciences
With more than 1,100 employees, including 150 pioneering principal investigators, as well as a population of about 3,600 passionate students, the Faculty of Applied Sciences is an inspiring scientific ecosystem. Focusing on key enabling technologies, such as quantum- and nanotechnology, photonics, biotechnology, synthetic biology and materials for energy storage and conversion, our faculty aims to provide solutions to important problems of the 21st century. To that end, we educate innovative students in broad Bachelor's and specialist Master's programmes with a strong research component. Our scientists conduct ground-breaking fundamental and applied research in the fields of Life and Health Science & Technology, Nanoscience, Chemical Engineering, Radiation Science & Technology, and Engineering Physics. We are also training the next generation of high school teachers.
about this vacancy, please contact Robbert Kleerebezem (
[email protected])
Application procedure
Are you interested in this vacancy? Please apply no later than 16 August 2026 upload the following documents:
CV
Motivational letter
You can address your application to Robbert Kleerebezem.
Doing a PhD at TU Delft requires English proficiency at a certain level to ensure that the candidate is able to communicate and interact well, participate in English-taught Doctoral Education courses, and write scientific articles and a final thesis. For more details please check the Graduate Schools Admission Requirements.
Please note:
You can apply online. We will not process applications sent by email and/or post.
As part of knowledge security, TU Delft conducts a risk assessment during the recruitment of personnel. We do this, among other things, to prevent the unwanted transfer of sensitive knowledge and technology. The assessment is based on information provided by the candidates themselves, such as their motivation letter and CV, and takes place at the final stages of the selection process. When the outcome of the assessment is negative, the candidate will be informed. The processing of personal data in the context of the risk assessment is carried out on the legal basis of the GDPR: performing a public task in the public interest. You can find more information about this assessment on our website about knowledge security.
Please do not contact us for unsolicited services.
Faculty/Department: Faculty of Applied Sciences
Salary range: €3059 - €3881
Submission is possible until: 16 Aug 2026
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